Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs7813808 | chr8:3240875 | G/C | CSMD1 | chr8:2792875-4852494:- | -0.32 | -6.19 | 1.29E-9 | Box Plot |
| THCA | rs7813935 | chr8:11795636 | A/G | SGK223 | chr8:8175258-8244008:- | -0.45 | -8.43 | 4.09E-16 | Box Plot |
| THCA | rs7814499 | chr8:11040647 | A/G | SGK223 | chr8:8175258-8244008:- | 0.48 | 9.49 | 1.05E-19 | Box Plot |
| THCA | rs7814795 | chr8:10519285 | C/T | SGK223 | chr8:8175258-8244008:- | 0.31 | 6.11 | 2.1E-9 | Box Plot |
| THCA | rs7815179 | chr8:11792048 | C/G | SGK223 | chr8:8175258-8244008:- | -0.47 | -8.72 | 4.61E-17 | Box Plot |
| THCA | rs7815186 | chr8:11792062 | C/G | SGK223 | chr8:8175258-8244008:- | -0.47 | -8.72 | 4.61E-17 | Box Plot |
| THCA | rs7815237 | chr8:3259985 | A/G | CSMD1 | chr8:2792875-4852494:- | -0.51 | -10.2 | 2.99E-22 | Box Plot |
| THCA | rs7815361 | chr8:3260065 | A/G | CSMD1 | chr8:2792875-4852494:- | -0.51 | -10.23 | 2.39E-22 | Box Plot |
| THCA | rs7815463 | chr8:11210983 | A/G | SGK223 | chr8:8175258-8244008:- | -0.37 | -6.9 | 1.71E-11 | Box Plot |
| THCA | rs7815572 | chr8:11792299 | C/T | SGK223 | chr8:8175258-8244008:- | -0.47 | -8.72 | 4.61E-17 | Box Plot |
| THCA | rs7815595 | chr8:11792351 | C/A | SGK223 | chr8:8175258-8244008:- | -0.46 | -8.54 | 1.75E-16 | Box Plot |
| THCA | rs7815802 | chr8:11190647 | G/C | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.56 | 1.37E-10 | Box Plot |
| THCA | rs7815804 | chr8:11187078 | G/T | SGK223 | chr8:8175258-8244008:- | -0.34 | -6.47 | 2.36E-10 | Box Plot |
| THCA | rs7816182 | chr8:11792701 | C/T | SGK223 | chr8:8175258-8244008:- | -0.46 | -8.56 | 1.56E-16 | Box Plot |
| THCA | rs7816601 | chr8:11205593 | T/C | SGK223 | chr8:8175258-8244008:- | -0.37 | -6.94 | 1.27E-11 | Box Plot |